Evolutionary Hypothesis

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We all know that evolutionary theory is a hypothesis. As a hypothesis, it means that there are focal points that science can’t explain.
For example:
There are a fixed number of chromosome varies in different organisms. Evolutionary theory talks about how a species evolves into a new species. However, since evolution creates new species, it means that there will be a change in the number of chromosome of the two species.
There are twenty-three pairs of chromosome in a human being, and there are twenty-four pairs of chromosome in a chimpanzee. In this case, is the change, which is one less pair of chromosome, caused by mutation?
Mutation is a blind and directionless changing in genetic; it doesn’t mean anything by itself. Mutation is recessive